Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AL358472.3-201ENST00000608147 415 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AC007718.1-201ENST00000621078 280 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 MST1L-201ENST00000442552 2185 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AL138725.1-201ENST00000407347 1314 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AL662844.4-201ENST00000606367 2838 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SNORD3B-2-202ENST00000571722 791 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 AC009955.4-201ENST00000597192 544 ntBASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13DQ5THJ4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 RN7SKP175-201ENST00000408472 289 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 IGLV3-15-201ENST00000518356 244 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL161670.2-201ENST00000557650 1227 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 MIR3147-201ENST00000577811 66 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AC011491.1-203ENST00000637688 543 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 AL805961.1-203ENST00000641078 1258 ntBASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13DQ5THJ4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13DQ5THJ4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms