Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 RPS2P28-201ENST00000314255 741 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 RPS15P9-201ENST00000494093 319 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AL662844.1-201ENST00000546340 181 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 SART3-203ENST00000546611 1184 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 MTDHP3-201ENST00000594186 672 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AL121912.1-201ENST00000603683 238 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AC140479.7-201ENST00000636301 2332 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 AC127383.1-201ENST00000444697 1800 ntBASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.2□□□□□ -0.3
ANKRD55Q3KP44 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 EMBP1-201ENST00000458200 901 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AC073648.2-201ENST00000510116 352 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AP002469.2-201ENST00000531724 424 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AL031055.1-201ENST00000606362 631 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AL355877.3-201ENST00000622820 899 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AC018892.3-201ENST00000623986 2499 ntBASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ANKRD55Q3KP44 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms