Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 EEF1DP4-201ENST00000446006 880 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 CTBP2P4-201ENST00000513884 920 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 AP001527.2-201ENST00000614441 631 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 TPM3P8-201ENST00000330554 643 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AC026316.1-201ENST00000398900 414 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AC107373.2-201ENST00000607735 490 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AL136301.1-201ENST00000615830 422 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 AC103691.2-201ENST00000618824 433 ntBASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO4Q2I0M5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 AC124947.2-201ENST00000547118 1133 ntBASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 AC000095.1-201ENST00000603208 874 ntBASIC15.16■□□□□ 0.02
RSPO4Q2I0M5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms