Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 AL109954.1-202ENST00000564051 2148 ntBASIC16.87■□□□□ 0.29
CDR2Q01850 DBET-201ENST00000630918 3363 ntBASIC16.87■□□□□ 0.29
CDR2Q01850 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 MTND6P24-201ENST00000440466 518 ntBASIC16.87■□□□□ 0.29
CDR2Q01850 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.87■□□□□ 0.29
CDR2Q01850 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.87■□□□□ 0.29
CDR2Q01850 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CDR2Q01850 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDR2Q01850 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AL136379.1-201ENST00000623471 2642 ntBASIC16.86■□□□□ 0.29
CDR2Q01850 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AC112693.3-201ENST00000624819 1983 ntBASIC16.86■□□□□ 0.29
CDR2Q01850 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AC023157.3-201ENST00000619086 2088 ntBASIC16.86■□□□□ 0.29
CDR2Q01850 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CDR2Q01850 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.86■□□□□ 0.29
CDR2Q01850 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.86■□□□□ 0.29
CDR2Q01850 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.86■□□□□ 0.29
CDR2Q01850 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
CDR2Q01850 SNHG9-202ENST00000564014 471 ntBASIC16.86■□□□□ 0.29
CDR2Q01850 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AC006486.2-201ENST00000624246 2199 ntBASIC16.86■□□□□ 0.29
CDR2Q01850 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDR2Q01850 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.86■□□□□ 0.29
CDR2Q01850 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDR2Q01850 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.86■□□□□ 0.29
CDR2Q01850 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDR2Q01850 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDR2Q01850 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDR2Q01850 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDR2Q01850 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDR2Q01850 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDR2Q01850 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms