Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.22■□□□□ 0.03
SH3BGRP55822 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.22■□□□□ 0.03
SH3BGRP55822 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.22■□□□□ 0.03
SH3BGRP55822 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SH3BGRP55822 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.22■□□□□ 0.03
SH3BGRP55822 OR7E14P-202ENST00000530490 1290 ntBASIC15.22■□□□□ 0.03
SH3BGRP55822 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SH3BGRP55822 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.22■□□□□ 0.03
SH3BGRP55822 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SH3BGRP55822 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SH3BGRP55822 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3BGRP55822 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SH3BGRP55822 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 AC087481.3-201ENST00000602886 1894 ntBASIC15.21■□□□□ 0.03
SH3BGRP55822 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SH3BGRP55822 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3BGRP55822 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.21■□□□□ 0.03
SH3BGRP55822 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 AC093909.1-201ENST00000504731 1122 ntBASIC15.21■□□□□ 0.03
SH3BGRP55822 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3BGRP55822 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.21■□□□□ 0.03
SH3BGRP55822 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3BGRP55822 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3BGRP55822 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SH3BGRP55822 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3BGRP55822 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SH3BGRP55822 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.21■□□□□ 0.02
SH3BGRP55822 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
SH3BGRP55822 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.21■□□□□ 0.02
SH3BGRP55822 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SH3BGRP55822 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SH3BGRP55822 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SH3BGRP55822 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SH3BGRP55822 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3BGRP55822 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3BGRP55822 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3BGRP55822 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3BGRP55822 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3BGRP55822 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3BGRP55822 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.2■□□□□ 0.02
SH3BGRP55822 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3BGRP55822 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.2■□□□□ 0.02
SH3BGRP55822 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms