Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
RAD23BP54727 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.92■□□□□ 0.3
RAD23BP54727 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC009477.1-201ENST00000452936 217 ntBASIC16.92■□□□□ 0.3
RAD23BP54727 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC093214.1-201ENST00000511688 1107 ntBASIC16.92■□□□□ 0.3
RAD23BP54727 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 AL607033.1-201ENST00000623900 1599 ntBASIC16.92■□□□□ 0.3
RAD23BP54727 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RAD23BP54727 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAD23BP54727 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.92■□□□□ 0.3
RAD23BP54727 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAD23BP54727 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RAD23BP54727 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.91■□□□□ 0.3
RAD23BP54727 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.91■□□□□ 0.3
RAD23BP54727 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.91■□□□□ 0.3
RAD23BP54727 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 TARDBPP1-201ENST00000442013 1203 ntBASIC16.91■□□□□ 0.3
RAD23BP54727 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.91■□□□□ 0.3
RAD23BP54727 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
RAD23BP54727 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.91■□□□□ 0.3
RAD23BP54727 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 AC009407.1-201ENST00000568958 598 ntBASIC16.91■□□□□ 0.3
RAD23BP54727 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
RAD23BP54727 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.91■□□□□ 0.3
RAD23BP54727 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
RAD23BP54727 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAD23BP54727 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RAD23BP54727 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAD23BP54727 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 AC092384.3-202ENST00000564646 2873 ntBASIC16.91■□□□□ 0.3
RAD23BP54727 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAD23BP54727 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAD23BP54727 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAD23BP54727 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms