Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 AC073347.1-201ENST00000421633 2643 ntBASIC16.92■□□□□ 0.3
SSR1P43307 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR1P43307 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SSR1P43307 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR1P43307 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.91■□□□□ 0.3
SSR1P43307 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SSR1P43307 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SSR1P43307 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.91■□□□□ 0.3
SSR1P43307 TIMM8BP1-201ENST00000452384 211 ntBASIC16.91■□□□□ 0.3
SSR1P43307 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR1P43307 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 IGHV3-62-201ENST00000520057 340 ntBASIC16.91■□□□□ 0.3
SSR1P43307 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR1P43307 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR1P43307 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 AC024267.1-201ENST00000582320 895 ntBASIC16.91■□□□□ 0.3
SSR1P43307 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR1P43307 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR1P43307 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR1P43307 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR1P43307 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSR1P43307 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR1P43307 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
SSR1P43307 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.9■□□□□ 0.3
SSR1P43307 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 AC008267.7-201ENST00000624570 1194 ntBASIC16.9■□□□□ 0.3
SSR1P43307 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SSR1P43307 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SSR1P43307 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR1P43307 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms