Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
HMGCLP35914 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 UGT1A2P-201ENST00000454886 866 ntBASIC15.7■□□□□ 0.1
HMGCLP35914 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCLP35914 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 AC138969.3-201ENST00000546612 1459 ntBASIC15.7■□□□□ 0.1
HMGCLP35914 AC138932.2-201ENST00000548268 1459 ntBASIC15.7■□□□□ 0.1
HMGCLP35914 AC126755.4-201ENST00000549796 1459 ntBASIC15.7■□□□□ 0.1
HMGCLP35914 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCLP35914 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGCLP35914 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCLP35914 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 SSR4P1-203ENST00000599569 2260 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCLP35914 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 AL133267.1-201ENST00000398220 340 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCLP35914 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGCLP35914 BCRP1-201ENST00000444246 691 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCLP35914 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 MEIS3P1-201ENST00000495167 958 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 SPDYE18-201ENST00000510091 1050 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGCLP35914 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 AC009118.2-201ENST00000613275 655 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
HMGCLP35914 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HMGCLP35914 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGCLP35914 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 AC087481.3-201ENST00000602886 1894 ntBASIC15.69■□□□□ 0.1
HMGCLP35914 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGCLP35914 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCLP35914 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HMGCLP35914 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCLP35914 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCLP35914 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms