Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 NFIC-211ENST00000641145 8399 ntBASIC15.2■□□□□ 0.02
HTR1EP28566 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 AC092127.1-201ENST00000567093 3455 ntBASIC15.2■□□□□ 0.02
HTR1EP28566 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.2■□□□□ 0.02
HTR1EP28566 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 TIMM8BP1-201ENST00000452384 211 ntBASIC15.2■□□□□ 0.02
HTR1EP28566 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.2■□□□□ 0.02
HTR1EP28566 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.2■□□□□ 0.02
HTR1EP28566 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 Z92544.3-201ENST00000624747 417 ntBASIC15.2■□□□□ 0.02
HTR1EP28566 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HTR1EP28566 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HTR1EP28566 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1EP28566 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1EP28566 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 AC106881.1-201ENST00000605849 3329 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 CICP23-201ENST00000605013 2741 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 AC015922.1-201ENST00000421102 1152 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 FAM185BP-201ENST00000443595 716 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1EP28566 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 DUX4L27-201ENST00000554796 1261 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1EP28566 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 ACTL9-202ENST00000612068 1252 ntBASIC15.19■□□□□ 0.02
HTR1EP28566 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1EP28566 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1EP28566 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1EP28566 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1EP28566 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HTR1EP28566 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1EP28566 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HTR1EP28566 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.18■□□□□ 0.02
HTR1EP28566 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1EP28566 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1EP28566 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1EP28566 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms