Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.04□□□□□ -0.16
CTLA4P16410 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.04□□□□□ -0.16
CTLA4P16410 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.04□□□□□ -0.16
CTLA4P16410 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.04□□□□□ -0.16
CTLA4P16410 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CTLA4P16410 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 AL133215.2-201ENST00000609242 977 ntBASIC14.04□□□□□ -0.16
CTLA4P16410 AC007967.4-201ENST00000614700 386 ntBASIC14.04□□□□□ -0.16
CTLA4P16410 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CTLA4P16410 AC006058.4-201ENST00000624016 1670 ntBASIC14.04□□□□□ -0.16
CTLA4P16410 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.04□□□□□ -0.16
CTLA4P16410 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTLA4P16410 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
CTLA4P16410 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
CTLA4P16410 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
CTLA4P16410 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.03□□□□□ -0.16
CTLA4P16410 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 SPDYE17-201ENST00000412399 783 ntBASIC14.03□□□□□ -0.16
CTLA4P16410 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.03□□□□□ -0.16
CTLA4P16410 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.03□□□□□ -0.16
CTLA4P16410 AC092865.5-201ENST00000545435 363 ntBASIC14.03□□□□□ -0.16
CTLA4P16410 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.03□□□□□ -0.16
CTLA4P16410 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.03□□□□□ -0.16
CTLA4P16410 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.03□□□□□ -0.16
CTLA4P16410 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.03□□□□□ -0.16
CTLA4P16410 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.03□□□□□ -0.16
CTLA4P16410 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.03□□□□□ -0.16
CTLA4P16410 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.03□□□□□ -0.16
CTLA4P16410 AC091951.1-201ENST00000512854 2465 ntBASIC14.03□□□□□ -0.16
CTLA4P16410 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTLA4P16410 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
CTLA4P16410 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms