Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CD48P09326 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 TNRC18P2-201ENST00000417666 2714 ntBASIC16.38■□□□□ 0.21
CD48P09326 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.37■□□□□ 0.21
CD48P09326 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.37■□□□□ 0.21
CD48P09326 AC074338.1-201ENST00000416825 156 ntBASIC16.37■□□□□ 0.21
CD48P09326 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.37■□□□□ 0.21
CD48P09326 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.37■□□□□ 0.21
CD48P09326 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CD48P09326 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.37■□□□□ 0.21
CD48P09326 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CD48P09326 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CD48P09326 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
CD48P09326 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD48P09326 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.37■□□□□ 0.21
CD48P09326 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 CETN4P-206ENST00000642099 2168 ntBASIC16.36■□□□□ 0.21
CD48P09326 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.36■□□□□ 0.21
CD48P09326 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CD48P09326 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.36■□□□□ 0.21
CD48P09326 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.36■□□□□ 0.21
CD48P09326 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 AC093028.1-201ENST00000622998 982 ntBASIC16.36■□□□□ 0.21
CD48P09326 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.36■□□□□ 0.21
CD48P09326 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD48P09326 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.36■□□□□ 0.21
CD48P09326 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms