Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 AC104581.4-201ENST00000623126 3052 ntBASIC14.86□□□□□ -0.03
PDGFAP04085 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.86□□□□□ -0.03
PDGFAP04085 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.86□□□□□ -0.03
PDGFAP04085 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.86□□□□□ -0.03
PDGFAP04085 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 AC008735.3-201ENST00000596646 500 ntBASIC14.86□□□□□ -0.03
PDGFAP04085 AC026979.3-201ENST00000607315 403 ntBASIC14.86□□□□□ -0.03
PDGFAP04085 COX11-210ENST00000639671 696 ntBASIC14.86□□□□□ -0.03
PDGFAP04085 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDGFAP04085 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDGFAP04085 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PDGFAP04085 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PDGFAP04085 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFAP04085 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFAP04085 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 AL391256.1-201ENST00000443260 1855 ntBASIC14.85□□□□□ -0.03
PDGFAP04085 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.85□□□□□ -0.03
PDGFAP04085 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 ANKRD19P-201ENST00000338192 862 ntBASIC14.85□□□□□ -0.03
PDGFAP04085 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.85□□□□□ -0.03
PDGFAP04085 AC234783.1-201ENST00000441761 496 ntBASIC14.85□□□□□ -0.03
PDGFAP04085 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFAP04085 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFAP04085 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.85□□□□□ -0.03
PDGFAP04085 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.85□□□□□ -0.03
PDGFAP04085 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.85□□□□□ -0.03
PDGFAP04085 MIR6069-201ENST00000620069 79 ntBASIC14.85□□□□□ -0.03
PDGFAP04085 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
PDGFAP04085 CDC14C-201ENST00000428251 1719 ntBASIC14.85□□□□□ -0.03
PDGFAP04085 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
PDGFAP04085 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFAP04085 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFAP04085 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFAP04085 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms