Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15□□□□□ -0.01
MT-ND1P03886 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MT-ND1P03886 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
MT-ND1P03886 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 AC232323.1-201ENST00000540724 2099 ntBASIC15□□□□□ -0.01
MT-ND1P03886 REXO1L5P-201ENST00000622260 2098 ntBASIC15□□□□□ -0.01
MT-ND1P03886 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15□□□□□ -0.01
MT-ND1P03886 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15□□□□□ -0.01
MT-ND1P03886 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
MT-ND1P03886 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 ILF3-AS1-201ENST00000591501 1983 ntBASIC15□□□□□ -0.01
MT-ND1P03886 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
MT-ND1P03886 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
MT-ND1P03886 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15□□□□□ -0.01
MT-ND1P03886 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15□□□□□ -0.01
MT-ND1P03886 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 AC108751.1-201ENST00000490852 363 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 MIR4751-201ENST00000578027 74 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 AL031008.1-201ENST00000619963 541 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 AL645728.2-201ENST00000641974 660 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 AC005912.2-201ENST00000619492 2400 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.99□□□□□ -0.01
MT-ND1P03886 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.99□□□□□ -0.01
MT-ND1P03886 AC013726.1-201ENST00000563747 2285 ntBASIC14.99□□□□□ -0.01
MT-ND1P03886 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MT-ND1P03886 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.98□□□□□ -0.01
MT-ND1P03886 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.98□□□□□ -0.01
MT-ND1P03886 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.98□□□□□ -0.01
MT-ND1P03886 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
MT-ND1P03886 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.98□□□□□ -0.01
MT-ND1P03886 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MT-ND1P03886 AL031284.1-201ENST00000419297 478 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms