Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DQB1P01920 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQB1P01920 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQB1P01920 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC008608.2-201ENST00000606089 416 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AL121772.3-201ENST00000610840 674 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC093458.2-201ENST00000623150 629 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC011474.4-201ENST00000623523 2076 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DQB1P01920 AC152010.1-201ENST00000415779 2006 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 DGCR9-201ENST00000609630 2415 ntBASIC13.68□□□□□ -0.22
HLA-DQB1P01920 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AC113367.3-201ENST00000508316 1912 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 DUSP5P1-201ENST00000441325 1139 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 RPS15P9-201ENST00000494093 319 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 KRT18P31-201ENST00000506277 1292 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AP002469.2-201ENST00000531724 424 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 MIR3909-201ENST00000579518 119 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 MIR4515-201ENST00000584082 81 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 MIR4321-201ENST00000592276 80 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 AC006557.2-201ENST00000592985 1240 ntBASIC13.67□□□□□ -0.22
HLA-DQB1P01920 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DQB1P01920 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms