Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 AC092506.1-202ENST00000401022 528 ntBASIC17.36■□□□□ 0.37
CD4P01730 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.36■□□□□ 0.37
CD4P01730 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 AC025279.2-201ENST00000569730 653 ntBASIC17.36■□□□□ 0.37
CD4P01730 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.36■□□□□ 0.37
CD4P01730 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.36■□□□□ 0.37
CD4P01730 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.36■□□□□ 0.37
CD4P01730 AC097359.3-201ENST00000603982 1210 ntBASIC17.36■□□□□ 0.37
CD4P01730 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.36■□□□□ 0.37
CD4P01730 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.36■□□□□ 0.37
CD4P01730 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 DRD5P1-201ENST00000456605 1438 ntBASIC17.36■□□□□ 0.37
CD4P01730 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
CD4P01730 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.36■□□□□ 0.37
CD4P01730 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD4P01730 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CD4P01730 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CD4P01730 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.35■□□□□ 0.37
CD4P01730 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.35■□□□□ 0.37
CD4P01730 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 AL022328.3-201ENST00000607943 679 ntBASIC17.35■□□□□ 0.37
CD4P01730 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 AL121723.1-201ENST00000445194 1519 ntBASIC17.35■□□□□ 0.37
CD4P01730 AL607033.1-201ENST00000623900 1599 ntBASIC17.35■□□□□ 0.37
CD4P01730 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CD4P01730 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CD4P01730 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD4P01730 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms