Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDRT1O95170 AC041040.2-201ENST00000622926 2899 ntBASIC14.19□□□□□ -0.14
CDRT1O95170 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.19□□□□□ -0.14
CDRT1O95170 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDRT1O95170 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.19□□□□□ -0.14
CDRT1O95170 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 TSPY19P-201ENST00000418461 509 ntBASIC14.18□□□□□ -0.14
CDRT1O95170 HCG4-201ENST00000418983 998 ntBASIC14.18□□□□□ -0.14
CDRT1O95170 TSPY18P-201ENST00000441642 509 ntBASIC14.18□□□□□ -0.14
CDRT1O95170 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.18□□□□□ -0.14
CDRT1O95170 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.18□□□□□ -0.14
CDRT1O95170 REXO1L6P-202ENST00000619970 1078 ntBASIC14.18□□□□□ -0.14
CDRT1O95170 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDRT1O95170 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDRT1O95170 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDRT1O95170 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.18□□□□□ -0.14
CDRT1O95170 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDRT1O95170 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDRT1O95170 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDRT1O95170 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 PTENP1-202ENST00000532280 3996 ntBASIC14.17□□□□□ -0.14
CDRT1O95170 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 RPS15P9-201ENST00000494093 319 ntBASIC14.17□□□□□ -0.14
CDRT1O95170 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 PRELID1P1-202ENST00000567272 903 ntBASIC14.17□□□□□ -0.14
CDRT1O95170 AC006557.2-201ENST00000592985 1240 ntBASIC14.17□□□□□ -0.14
CDRT1O95170 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CDRT1O95170 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms