Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF253O75346 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF253O75346 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF253O75346 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF253O75346 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 AC007191.1-201ENST00000623179 2995 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 AC079781.5-202ENST00000641784 3743 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 RPS2P28-201ENST00000314255 741 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 RPS2P1-201ENST00000434010 821 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 PRSS29P-201ENST00000440800 595 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 AF238378.1-201ENST00000526806 358 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 AC105339.3-201ENST00000560043 636 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 AL031432.2-201ENST00000566714 459 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 AL928711.1-201ENST00000570165 459 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ACTL9-202ENST00000612068 1252 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 AC136621.1-201ENST00000624017 2304 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
ZNF253O75346 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF253O75346 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 AC005252.3-201ENST00000623855 2258 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF253O75346 LINC01101-201ENST00000622953 1884 ntBASIC12.4□□□□□ -0.42
ZNF253O75346 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ZNF253O75346 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF253O75346 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.4□□□□□ -0.43
ZNF253O75346 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF253O75346 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZNF253O75346 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF253O75346 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZNF253O75346 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF253O75346 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ZNF253O75346 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 AC011477.6-201ENST00000604980 1927 ntBASIC12.39□□□□□ -0.43
ZNF253O75346 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF253O75346 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ZNF253O75346 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
ZNF253O75346 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF253O75346 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF253O75346 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms