Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA12O60330 CDC14C-201ENST00000428251 1719 ntBASIC15.71■□□□□ 0.1
PCDHGA12O60330 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHGA12O60330 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHGA12O60330 AL365203.3-201ENST00000609742 2057 ntBASIC15.71■□□□□ 0.1
PCDHGA12O60330 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CYP4F24P-201ENST00000586049 1580 ntBASIC15.7■□□□□ 0.1
PCDHGA12O60330 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AC104989.1-201ENST00000519711 778 ntBASIC15.7■□□□□ 0.1
PCDHGA12O60330 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA12O60330 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 Z97205.2-201ENST00000564697 1639 ntBASIC15.69■□□□□ 0.1
PCDHGA12O60330 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 SNX29P1-201ENST00000548357 1007 ntBASIC15.69■□□□□ 0.1
PCDHGA12O60330 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 AC010319.3-201ENST00000597028 470 ntBASIC15.69■□□□□ 0.1
PCDHGA12O60330 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.69■□□□□ 0.1
PCDHGA12O60330 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGA12O60330 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGA12O60330 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms