Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.97□□□□□ -0.33
SSSCA1O60232 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.97□□□□□ -0.33
SSSCA1O60232 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 AC091076.1-201ENST00000610741 619 ntBASIC12.97□□□□□ -0.33
SSSCA1O60232 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 AC148477.4-201ENST00000613430 1793 ntBASIC12.97□□□□□ -0.33
SSSCA1O60232 AC087386.2-201ENST00000623212 4637 ntBASIC12.97□□□□□ -0.33
SSSCA1O60232 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.96□□□□□ -0.33
SSSCA1O60232 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.96□□□□□ -0.33
SSSCA1O60232 TMPOP1-202ENST00000424642 1267 ntBASIC12.96□□□□□ -0.33
SSSCA1O60232 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.96□□□□□ -0.33
SSSCA1O60232 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.96□□□□□ -0.33
SSSCA1O60232 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.96□□□□□ -0.33
SSSCA1O60232 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.96□□□□□ -0.33
SSSCA1O60232 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSSCA1O60232 AC092119.3-201ENST00000612618 583 ntBASIC12.96□□□□□ -0.33
SSSCA1O60232 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.96□□□□□ -0.33
SSSCA1O60232 PTENP1-202ENST00000532280 3996 ntBASIC12.96□□□□□ -0.33
SSSCA1O60232 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSSCA1O60232 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SSSCA1O60232 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
SSSCA1O60232 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSSCA1O60232 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.96□□□□□ -0.34
SSSCA1O60232 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSSCA1O60232 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SSSCA1O60232 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSSCA1O60232 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.96□□□□□ -0.34
SSSCA1O60232 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSSCA1O60232 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.96□□□□□ -0.34
SSSCA1O60232 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.96□□□□□ -0.34
SSSCA1O60232 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.96□□□□□ -0.34
SSSCA1O60232 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SSSCA1O60232 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.95□□□□□ -0.34
SSSCA1O60232 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms