Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 AC139749.1-202ENST00000617529 3139 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 AC245100.5-201ENST00000452108 331 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 IGHV3-65-201ENST00000523210 341 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 AF238378.1-201ENST00000526806 358 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 AC105339.3-201ENST00000560043 636 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 AL356488.2-201ENST00000602755 427 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 FGD5P1-202ENST00000614866 2498 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 AC008735.5-201ENST00000623544 497 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NDUFA1O15239 KRT8P44-201ENST00000441609 1350 ntBASIC10.88□□□□□ -0.67
NDUFA1O15239 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 AC005912.2-201ENST00000619492 2400 ntBASIC10.87□□□□□ -0.67
NDUFA1O15239 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 AC073621.1-201ENST00000392730 636 ntBASIC10.87□□□□□ -0.67
NDUFA1O15239 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.87□□□□□ -0.67
NDUFA1O15239 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 RNPS1P1-201ENST00000507437 918 ntBASIC10.87□□□□□ -0.67
NDUFA1O15239 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms