Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 ISCA2P1-201ENST00000425548 448 ntBASIC18.7■□□□□ 0.58
NFKBIEO00221 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NFKBIEO00221 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.7■□□□□ 0.58
NFKBIEO00221 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.7■□□□□ 0.58
NFKBIEO00221 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.7■□□□□ 0.58
NFKBIEO00221 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
NFKBIEO00221 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
NFKBIEO00221 AP001094.4-201ENST00000579008 2176 ntBASIC18.7■□□□□ 0.58
NFKBIEO00221 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.7■□□□□ 0.58
NFKBIEO00221 AL805961.1-201ENST00000642026 753 ntBASIC18.7■□□□□ 0.58
NFKBIEO00221 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
NFKBIEO00221 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.69■□□□□ 0.58
NFKBIEO00221 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
NFKBIEO00221 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NFKBIEO00221 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.69■□□□□ 0.58
NFKBIEO00221 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AC005324.6-201ENST00000587972 613 ntBASIC18.69■□□□□ 0.58
NFKBIEO00221 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.69■□□□□ 0.58
NFKBIEO00221 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AC087045.2-201ENST00000606279 1003 ntBASIC18.69■□□□□ 0.58
NFKBIEO00221 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.69■□□□□ 0.58
NFKBIEO00221 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.69■□□□□ 0.58
NFKBIEO00221 AL162426.1-201ENST00000624141 743 ntBASIC18.69■□□□□ 0.58
NFKBIEO00221 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.69■□□□□ 0.58
NFKBIEO00221 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKBIEO00221 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 AL645608.8-201ENST00000606034 2086 ntBASIC18.69■□□□□ 0.58
NFKBIEO00221 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
NFKBIEO00221 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKBIEO00221 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.68■□□□□ 0.58
NFKBIEO00221 AC106820.2-201ENST00000563775 3264 ntBASIC18.68■□□□□ 0.58
NFKBIEO00221 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
NFKBIEO00221 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 AL645937.2-201ENST00000396808 931 ntBASIC18.68■□□□□ 0.58
NFKBIEO00221 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 AL353637.1-201ENST00000451571 732 ntBASIC18.68■□□□□ 0.58
NFKBIEO00221 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 MIR6756-201ENST00000616240 63 ntBASIC18.68■□□□□ 0.58
NFKBIEO00221 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 AC011477.6-201ENST00000604980 1927 ntBASIC18.68■□□□□ 0.58
NFKBIEO00221 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NFKBIEO00221 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NFKBIEO00221 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NFKBIEO00221 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKBIEO00221 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKBIEO00221 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKBIEO00221 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKBIEO00221 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NFKBIEO00221 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms