Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
AP3B1O00203 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.01■□□□□ 0.15
AP3B1O00203 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
AP3B1O00203 RPL5P21-201ENST00000404620 815 ntBASIC16.01■□□□□ 0.15
AP3B1O00203 SPDYE7P-202ENST00000420373 878 ntBASIC16.01■□□□□ 0.15
AP3B1O00203 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.01■□□□□ 0.15
AP3B1O00203 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.01■□□□□ 0.15
AP3B1O00203 AL671883.3-201ENST00000603274 991 ntBASIC16.01■□□□□ 0.15
AP3B1O00203 AC097359.3-201ENST00000603982 1210 ntBASIC16.01■□□□□ 0.15
AP3B1O00203 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.01■□□□□ 0.15
AP3B1O00203 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP3B1O00203 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.01■□□□□ 0.15
AP3B1O00203 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
AP3B1O00203 AC126365.1-201ENST00000578585 1514 ntBASIC16■□□□□ 0.15
AP3B1O00203 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 RBPMS2P1-201ENST00000437762 623 ntBASIC16■□□□□ 0.15
AP3B1O00203 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16■□□□□ 0.15
AP3B1O00203 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16■□□□□ 0.15
AP3B1O00203 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16■□□□□ 0.15
AP3B1O00203 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
AP3B1O00203 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
AP3B1O00203 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP3B1O00203 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16■□□□□ 0.15
AP3B1O00203 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
AP3B1O00203 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.99■□□□□ 0.15
AP3B1O00203 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 AC003101.2-201ENST00000612557 442 ntBASIC15.99■□□□□ 0.15
AP3B1O00203 AC009093.7-201ENST00000623853 1223 ntBASIC15.99■□□□□ 0.15
AP3B1O00203 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
AP3B1O00203 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP3B1O00203 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
AP3B1O00203 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms