Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 LINC01101-201ENST00000622953 1884 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PMS2P7-201ENST00000506558 1336 ntBASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV5A0A0B4J249 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 LINC00552-201ENST00000625151 2579 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AC127383.1-201ENST00000444697 1800 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AC007292.2-201ENST00000593524 1812 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 IGLL3P-201ENST00000412472 434 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 VN2R19P-201ENST00000442399 1052 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AF186996.4-201ENST00000467186 377 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AC109635.5-201ENST00000533593 962 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 MIR4313-201ENST00000580760 101 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 WASH6P-202ENST00000359512 1437 ntBASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV5A0A0B4J249 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 KRT8P44-201ENST00000441609 1350 ntBASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms