Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SATB2Q9UPW6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 MIR658-201ENST00000385210 100 ntBASIC15.58■□□□□ 0.08
SATB2Q9UPW6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 RAB43P1-201ENST00000561790 589 ntBASIC15.58■□□□□ 0.08
SATB2Q9UPW6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 SLC7A15P-201ENST00000424028 1363 ntBASIC15.58■□□□□ 0.08
SATB2Q9UPW6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.58■□□□□ 0.08
SATB2Q9UPW6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SATB2Q9UPW6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 SNX33P1-201ENST00000592116 1762 ntBASIC15.57■□□□□ 0.08
SATB2Q9UPW6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC055876.2-201ENST00000531834 546 ntBASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AC067930.6-201ENST00000623257 4947 ntBASIC15.57■□□□□ 0.08
SATB2Q9UPW6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SATB2Q9UPW6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms