Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AC016027.1-202ENST00000607927 1699 ntBASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AC106886.1-201ENST00000568660 600 ntBASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AC009407.1-201ENST00000568958 598 ntBASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMG5Q9UPR3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 TOP3BP1-201ENST00000420768 1380 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RNU1-129P-201ENST00000384064 167 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AC104794.3-201ENST00000566840 1248 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 U1.21-201ENST00000580816 167 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 KRT8P39-201ENST00000396270 1433 ntBASIC16.69■□□□□ 0.26
SMG5Q9UPR3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMG5Q9UPR3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 LINC01144-201ENST00000626198 1710 ntBASIC16.68■□□□□ 0.26
SMG5Q9UPR3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.68■□□□□ 0.26
SMG5Q9UPR3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 DFFBP1-201ENST00000433250 979 ntBASIC16.68■□□□□ 0.26
SMG5Q9UPR3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 MIR4525-201ENST00000580000 75 ntBASIC16.68■□□□□ 0.26
SMG5Q9UPR3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMG5Q9UPR3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms