Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 AC093726.1-201ENST00000608064 963 ntBASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 MIR6069-201ENST00000620069 79 ntBASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.39■□□□□ 0.85
PDZRN3Q9UPQ7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 AC234783.1-201ENST00000441761 496 ntBASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 SPDYE18-201ENST00000510091 1050 ntBASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.38■□□□□ 0.85
PDZRN3Q9UPQ7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 ELK1P1-201ENST00000485699 580 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC123567.1-201ENST00000548294 1261 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 TMEM261P1-201ENST00000604899 340 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC004461.2-201ENST00000629517 803 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 COX11-210ENST00000639671 696 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC144831.1-201ENST00000573312 2656 ntBASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDZRN3Q9UPQ7 AC104640.1-201ENST00000562617 2109 ntBASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms