Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.29□□□□□ -0.12
ZNF346Q9UL40 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 RARRES2P9-201ENST00000565168 469 ntBASIC14.29□□□□□ -0.12
ZNF346Q9UL40 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 AC055717.3-201ENST00000622967 595 ntBASIC14.29□□□□□ -0.12
ZNF346Q9UL40 PKD1P5-201ENST00000532415 10291 ntBASIC14.29□□□□□ -0.12
ZNF346Q9UL40 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 AC090616.6-203ENST00000579186 1945 ntBASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF346Q9UL40 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC067930.6-201ENST00000623257 4947 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC005237.2-201ENST00000434368 219 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 KRT8P37-201ENST00000451609 1420 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AP000344.2-201ENST00000512987 629 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC022145.2-201ENST00000598203 171 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC026979.3-201ENST00000607315 403 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC138035.3-201ENST00000622706 2791 ntBASIC14.28□□□□□ -0.12
ZNF346Q9UL40 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF346Q9UL40 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF346Q9UL40 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF346Q9UL40 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 428.1 ms