Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC004790.1-201ENST00000612686 536 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SSR4P1-203ENST00000599569 2260 ntBASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC1Q9NTX5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AL589987.1-201ENST00000453380 819 ntBASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 TIMM17BP1-201ENST00000545713 516 ntBASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AC104794.3-201ENST00000566840 1248 ntBASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 AC136621.1-201ENST00000624017 2304 ntBASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC1Q9NTX5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC1Q9NTX5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 AC046158.3-201ENST00000624947 2558 ntBASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.19■□□□□ 0.66
ECHDC1Q9NTX5 AC011467.4-201ENST00000594891 528 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms