Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 AC007950.2-201ENST00000615045 2347 ntBASIC13.28□□□□□ -0.28
CCL13Q99616 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCL13Q99616 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCL13Q99616 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCL13Q99616 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
CCL13Q99616 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL13Q99616 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCL13Q99616 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL13Q99616 TSSK5P-201ENST00000423978 907 ntBASIC13.27□□□□□ -0.29
CCL13Q99616 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.27□□□□□ -0.29
CCL13Q99616 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL13Q99616 INGX-202ENST00000489074 768 ntBASIC13.27□□□□□ -0.29
CCL13Q99616 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL13Q99616 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 RNA5SP421-201ENST00000516864 134 ntBASIC13.27□□□□□ -0.29
CCL13Q99616 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL13Q99616 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CCL13Q99616 AL844908.2-201ENST00000609461 460 ntBASIC13.27□□□□□ -0.29
CCL13Q99616 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL13Q99616 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL13Q99616 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL13Q99616 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL13Q99616 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CCL13Q99616 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CCL13Q99616 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL13Q99616 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL13Q99616 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.26□□□□□ -0.29
CCL13Q99616 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CCL13Q99616 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL13Q99616 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL13Q99616 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL13Q99616 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL13Q99616 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms