Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 GGT4P-201ENST00000623672 1708 ntBASIC13.44□□□□□ -0.26
CLCC1Q96S66 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 FP325330.2-201ENST00000624219 5630 ntBASIC13.44□□□□□ -0.26
CLCC1Q96S66 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 POU5F1P6-201ENST00000466990 990 ntBASIC13.44□□□□□ -0.26
CLCC1Q96S66 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CLCC1Q96S66 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCC1Q96S66 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 AL603832.2-201ENST00000566195 2125 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 PMS2P1-201ENST00000431037 1228 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 AC108751.1-201ENST00000490852 363 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 AL662844.1-201ENST00000546340 181 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 MPDU1-223ENST00000582151 728 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 REXO1L3P-201ENST00000622202 1288 ntBASIC13.43□□□□□ -0.26
CLCC1Q96S66 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLCC1Q96S66 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CLCC1Q96S66 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms