Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 AC007064.4-201ENST00000637740 555 ntBASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 LINC01230-201ENST00000625222 3017 ntBASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 FGD5P1-202ENST00000614866 2498 ntBASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHAMP1Q96JM3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AC013726.1-201ENST00000563747 2285 ntBASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AC005840.4-201ENST00000541242 2494 ntBASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AC104581.4-201ENST00000623126 3052 ntBASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AC148477.4-201ENST00000613430 1793 ntBASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHAMP1Q96JM3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms