Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 COX20P2-201ENST00000452636 358 ntBASIC16.39■□□□□ 0.21
IFT43Q96FT9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AC126755.1-201ENST00000525846 6405 ntBASIC16.38■□□□□ 0.21
IFT43Q96FT9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AC069120.2-201ENST00000524091 540 ntBASIC16.38■□□□□ 0.21
IFT43Q96FT9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AC061975.2-201ENST00000581722 295 ntBASIC16.38■□□□□ 0.21
IFT43Q96FT9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 MIR6080-201ENST00000617359 66 ntBASIC16.38■□□□□ 0.21
IFT43Q96FT9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
IFT43Q96FT9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 AP3S2-216ENST00000617003 1561 ntBASIC16.38■□□□□ 0.21
IFT43Q96FT9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IFT43Q96FT9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 AL603832.2-201ENST00000566195 2125 ntBASIC16.37■□□□□ 0.21
IFT43Q96FT9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.37■□□□□ 0.21
IFT43Q96FT9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IFT43Q96FT9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.37■□□□□ 0.21
IFT43Q96FT9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms