Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF4Q92544 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 OSM-203ENST00000403463 464 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF4Q92544 AL080243.2-201ENST00000418783 582 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TM9SF4Q92544 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15□□□□□ -0.01
TM9SF4Q92544 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF4Q92544 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 AL008721.1-201ENST00000609964 604 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 MIR6752-201ENST00000618442 71 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 AC138969.3-201ENST00000546612 1459 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 AC138932.2-201ENST00000548268 1459 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 AC126755.4-201ENST00000549796 1459 ntBASIC15□□□□□ -0.01
TM9SF4Q92544 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 AL671710.1-201ENST00000610245 2349 ntBASIC14.99□□□□□ -0.01
TM9SF4Q92544 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 AP006294.1-201ENST00000415407 339 ntBASIC14.99□□□□□ -0.01
TM9SF4Q92544 MEP1AP4-201ENST00000423244 1087 ntBASIC14.99□□□□□ -0.01
TM9SF4Q92544 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 GPR53P-205ENST00000457298 1084 ntBASIC14.99□□□□□ -0.01
TM9SF4Q92544 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 AL133215.2-201ENST00000609242 977 ntBASIC14.99□□□□□ -0.01
TM9SF4Q92544 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TM9SF4Q92544 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF4Q92544 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms