Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 AC069120.2-201ENST00000524091 540 ntBASIC16.82■□□□□ 0.28
DDX1Q92499 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.82■□□□□ 0.28
DDX1Q92499 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 C18orf15-201ENST00000623680 2534 ntBASIC16.82■□□□□ 0.28
DDX1Q92499 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DDX1Q92499 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
DDX1Q92499 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DDX1Q92499 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 CETN4P-206ENST00000642099 2168 ntBASIC16.81■□□□□ 0.28
DDX1Q92499 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DDX1Q92499 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.81■□□□□ 0.28
DDX1Q92499 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.81■□□□□ 0.28
DDX1Q92499 SPDYE12P-201ENST00000618416 771 ntBASIC16.81■□□□□ 0.28
DDX1Q92499 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
DDX1Q92499 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DDX1Q92499 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DDX1Q92499 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
DDX1Q92499 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.8■□□□□ 0.28
DDX1Q92499 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DDX1Q92499 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DDX1Q92499 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DDX1Q92499 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DDX1Q92499 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms