Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 C8orf49-201ENST00000525043 1968 ntBASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CFAP61Q8NHU2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KRT18P13-201ENST00000400056 1290 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 RPSAP43-201ENST00000402237 625 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AL355306.1-201ENST00000415580 579 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AL135744.1-201ENST00000565098 629 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 MIR4469-201ENST00000583919 79 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 AC005622.1-201ENST00000636801 1703 ntBASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP61Q8NHU2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 ELL2P1-201ENST00000413990 1906 ntBASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 MKNK2P1-201ENST00000437526 628 ntBASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP61Q8NHU2 SPDYE11-202ENST00000450699 704 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms