Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRN1Q8IZH2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 MESTP3-201ENST00000503460 968 ntBASIC21.38■■□□□ 1.01
XRN1Q8IZH2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 AC090164.2-201ENST00000611487 516 ntBASIC21.38■■□□□ 1.01
XRN1Q8IZH2 AL353770.1-201ENST00000614915 403 ntBASIC21.38■■□□□ 1.01
XRN1Q8IZH2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
XRN1Q8IZH2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 FLJ38576-201ENST00000623820 2459 ntBASIC21.37■■□□□ 1.01
XRN1Q8IZH2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 FGFR3P1-201ENST00000449999 601 ntBASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AC012618.1-201ENST00000461223 412 ntBASIC21.37■■□□□ 1.01
XRN1Q8IZH2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AC019193.1-201ENST00000506678 823 ntBASIC21.37■■□□□ 1.01
XRN1Q8IZH2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 AC026471.1-201ENST00000564629 3026 ntBASIC21.37■■□□□ 1.01
XRN1Q8IZH2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRN1Q8IZH2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 AC010141.1-201ENST00000411585 623 ntBASIC21.36■■□□□ 1.01
XRN1Q8IZH2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 AL353637.1-201ENST00000451571 732 ntBASIC21.36■■□□□ 1.01
XRN1Q8IZH2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC21.36■■□□□ 1.01
XRN1Q8IZH2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms