Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 RPS2P28-201ENST00000314255 741 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC140658.5-201ENST00000438532 169 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 HCG4B-203ENST00000450128 991 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC148477.8-201ENST00000624298 468 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 FAM215A-202ENST00000632077 792 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 AC010507.1-201ENST00000633895 436 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRRTM1Q86UE6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 AC139749.1-202ENST00000617529 3139 ntBASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRTM1Q86UE6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms