Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AL450487.1-201ENST00000426799 995 ntBASIC14.38□□□□□ -0.11
SHFQ7M4L6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AL662844.1-201ENST00000546340 181 ntBASIC14.38□□□□□ -0.11
SHFQ7M4L6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AC104692.2-201ENST00000603054 253 ntBASIC14.38□□□□□ -0.11
SHFQ7M4L6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHFQ7M4L6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.38□□□□□ -0.11
SHFQ7M4L6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC140658.5-201ENST00000438532 169 ntBASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC079776.4-201ENST00000511039 504 ntBASIC14.37□□□□□ -0.11
SHFQ7M4L6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms