Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDZRN4Q6ZMN7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 PCDHA3-202ENST00000532566 4594 ntBASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 AC254562.1-201ENST00000417586 456 ntBASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 PMS2P2-201ENST00000425039 1128 ntBASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDZRN4Q6ZMN7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AC087163.2-201ENST00000457299 853 ntBASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 SNHG9-202ENST00000564014 471 ntBASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AL596442.2-201ENST00000610240 980 ntBASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 AC007686.3-201ENST00000619017 3487 ntBASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.31■□□□□ 0.52
PDZRN4Q6ZMN7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDZRN4Q6ZMN7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms