Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.34□□□□□ -0.43
SHISA2Q6UWI4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.33□□□□□ -0.43
SHISA2Q6UWI4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 MIR326-201ENST00000362220 95 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 RPL13P2-201ENST00000440687 659 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 FAM86HP-204ENST00000513466 959 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AP001542.1-201ENST00000591314 200 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AC015967.2-201ENST00000624092 234 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AC006435.4-201ENST00000625037 234 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AL356737.1-201ENST00000634391 234 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 AL136982.4-201ENST00000437689 1740 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 U82695.1-201ENST00000635752 1889 ntBASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SHISA2Q6UWI4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SHISA2Q6UWI4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SHISA2Q6UWI4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SHISA2Q6UWI4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms