Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 PMS2P2-201ENST00000425039 1128 ntBASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 KLF2P3-201ENST00000451977 1087 ntBASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 Z92544.3-201ENST00000624747 417 ntBASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL1Q6NVV3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 NORAD-201ENST00000565493 5339 ntBASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 AC026748.1-201ENST00000624349 3251 ntBASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 AC140878.1-201ENST00000565277 250 ntBASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NIPAL1Q6NVV3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 AC068587.6-202ENST00000641839 5619 ntBASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
NIPAL1Q6NVV3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC004987.2-201ENST00000395959 1148 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC107890.1-201ENST00000422478 521 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC125807.1-201ENST00000483097 614 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC051619.7-201ENST00000568314 623 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC105021.1-202ENST00000570572 669 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC093028.1-201ENST00000622998 982 ntBASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL1Q6NVV3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms