Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.64■□□□□ 0.26
RNF43Q68DV7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF43Q68DV7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF43Q68DV7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC245100.5-201ENST00000452108 331 ntBASIC16.64■□□□□ 0.25
RNF43Q68DV7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 MIR6799-201ENST00000620297 69 ntBASIC16.64■□□□□ 0.25
RNF43Q68DV7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF43Q68DV7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF43Q68DV7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 AC026979.3-201ENST00000607315 403 ntBASIC16.63■□□□□ 0.25
RNF43Q68DV7 AL589739.1-201ENST00000607720 493 ntBASIC16.63■□□□□ 0.25
RNF43Q68DV7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF43Q68DV7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF43Q68DV7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 PPT1-215ENST00000641471 2368 ntBASIC16.62■□□□□ 0.25
RNF43Q68DV7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms