Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC005237.2-201ENST00000434368 219 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AL592309.1-201ENST00000443127 649 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC243562.1-201ENST00000560672 389 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC027612.4-201ENST00000605371 583 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AL031731.1-201ENST00000642131 2094 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AC005840.4-201ENST00000541242 2494 ntBASIC15.56■□□□□ 0.08
SFT2D3Q587I9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SFT2D3Q587I9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 KRT8P39-201ENST00000396270 1433 ntBASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 METTL21AP1-201ENST00000438852 635 ntBASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC005912.2-201ENST00000619492 2400 ntBASIC15.55■□□□□ 0.08
SFT2D3Q587I9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.55■□□□□ 0.08
SFT2D3Q587I9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SFT2D3Q587I9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms