Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AC097065.1-201ENST00000425737 517 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SLED1-202ENST00000512051 380 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AL161670.2-201ENST00000557650 1227 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AC132192.2-201ENST00000596206 1147 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 AF254983.2-201ENST00000612331 135 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 U82695.1-201ENST00000635752 1889 ntBASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RSPO4Q2I0M5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AC019193.1-201ENST00000506678 823 ntBASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 IGLV3-15-201ENST00000518356 244 ntBASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AC015910.1-201ENST00000579400 975 ntBASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 AC009053.2-201ENST00000563701 2365 ntBASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RSPO4Q2I0M5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 DRD5P1-201ENST00000456605 1438 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 AL691432.1-201ENST00000596308 1422 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 AC025271.4-201ENST00000621477 1726 ntBASIC15.18■□□□□ 0.02
RSPO4Q2I0M5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms