Protein–RNA interactions for Protein: P98194

ATP2C1, Calcium-transporting ATPase type 2C member 1, humanhuman

Predicted RBP Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1P98194 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2C1P98194 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2C1P98194 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2C1P98194 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2C1P98194 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2C1P98194 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2C1P98194 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2C1P98194 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 ZNF890P-202ENST00000530367 1156 ntBASIC17.82■□□□□ 0.44
ATP2C1P98194 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2C1P98194 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2C1P98194 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2C1P98194 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2C1P98194 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
ATP2C1P98194 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 AC100757.3-201ENST00000622361 1406 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP2C1P98194 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2C1P98194 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2C1P98194 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 TSSK5P-201ENST00000423978 907 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2C1P98194 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.81■□□□□ 0.44
ATP2C1P98194 DUX4L27-201ENST00000554796 1261 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 LINC01115-203ENST00000606068 577 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 AC074044.1-201ENST00000609673 707 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
ATP2C1P98194 AL590560.3-201ENST00000623350 461 ntBASIC17.81■□□□□ 0.44
ATP2C1P98194 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2C1P98194 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2C1P98194 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2C1P98194 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2C1P98194 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2C1P98194 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP2C1P98194 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.8■□□□□ 0.44
ATP2C1P98194 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.8■□□□□ 0.44
ATP2C1P98194 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATP2C1P98194 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP2C1P98194 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP2C1P98194 AF228730.6-201ENST00000641497 218 ntBASIC17.8■□□□□ 0.44
ATP2C1P98194 AC084121.3-201ENST00000641716 218 ntBASIC17.8■□□□□ 0.44
ATP2C1P98194 AL109936.8-201ENST00000641772 604 ntBASIC17.8■□□□□ 0.44
ATP2C1P98194 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATP2C1P98194 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2C1P98194 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms