Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNB1P98172 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNB1P98172 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 AC093909.1-201ENST00000504731 1122 ntBASIC14.13□□□□□ -0.15
EFNB1P98172 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 AC112191.1-201ENST00000523689 701 ntBASIC14.13□□□□□ -0.15
EFNB1P98172 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.13□□□□□ -0.15
EFNB1P98172 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
EFNB1P98172 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
EFNB1P98172 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EFNB1P98172 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB1P98172 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.12□□□□□ -0.15
EFNB1P98172 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB1P98172 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 FAAHP1-202ENST00000446499 1238 ntBASIC14.12□□□□□ -0.15
EFNB1P98172 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.12□□□□□ -0.15
EFNB1P98172 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.12□□□□□ -0.15
EFNB1P98172 RNA5SP410-201ENST00000516285 106 ntBASIC14.12□□□□□ -0.15
EFNB1P98172 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.12□□□□□ -0.15
EFNB1P98172 LINC01225-203ENST00000563550 1244 ntBASIC14.12□□□□□ -0.15
EFNB1P98172 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
EFNB1P98172 AP001005.1-201ENST00000571755 1248 ntBASIC14.12□□□□□ -0.15
EFNB1P98172 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
EFNB1P98172 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 AC084364.1-201ENST00000551967 1556 ntBASIC14.12□□□□□ -0.15
EFNB1P98172 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EFNB1P98172 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
EFNB1P98172 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms