Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.26□□□□□ -0.61
RPL39P62891 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 FOSL1P1-201ENST00000511041 816 ntBASIC11.26□□□□□ -0.61
RPL39P62891 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.26□□□□□ -0.61
RPL39P62891 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.26□□□□□ -0.61
RPL39P62891 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.26□□□□□ -0.61
RPL39P62891 AL365330.1-201ENST00000607459 531 ntBASIC11.26□□□□□ -0.61
RPL39P62891 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.26□□□□□ -0.61
RPL39P62891 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.26□□□□□ -0.61
RPL39P62891 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RPL39P62891 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RPL39P62891 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RPL39P62891 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.25□□□□□ -0.61
RPL39P62891 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.25□□□□□ -0.61
RPL39P62891 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.25□□□□□ -0.61
RPL39P62891 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 FGFR3P6-201ENST00000457012 610 ntBASIC11.25□□□□□ -0.61
RPL39P62891 AP002469.2-201ENST00000531724 424 ntBASIC11.25□□□□□ -0.61
RPL39P62891 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.25□□□□□ -0.61
RPL39P62891 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.25□□□□□ -0.61
RPL39P62891 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.25□□□□□ -0.61
RPL39P62891 AC025062.2-201ENST00000605477 670 ntBASIC11.25□□□□□ -0.61
RPL39P62891 AC008608.2-201ENST00000606089 416 ntBASIC11.25□□□□□ -0.61
RPL39P62891 AC091076.1-201ENST00000610741 619 ntBASIC11.25□□□□□ -0.61
RPL39P62891 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 KRT8P44-201ENST00000441609 1350 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms