Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AL390755.1-201ENST00000623716 2027 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC006504.5-208ENST00000588784 2401 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AL645929.1-201ENST00000420084 975 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TERC-201ENST00000602385 541 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC083849.1-201ENST00000615227 514 ntBASIC12.4□□□□□ -0.42
ERVFC1-1P60608 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.4□□□□□ -0.42
ERVFC1-1P60608 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 AC027612.1-201ENST00000445234 2395 ntBASIC12.4□□□□□ -0.43
ERVFC1-1P60608 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.4□□□□□ -0.43
ERVFC1-1P60608 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 AL031595.1-201ENST00000623969 4709 ntBASIC12.39□□□□□ -0.43
ERVFC1-1P60608 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.39□□□□□ -0.43
ERVFC1-1P60608 AC092597.1-201ENST00000487352 616 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms