Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CLDN20P56880 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CLDN20P56880 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 AC006449.6-201ENST00000612330 2296 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN20P56880 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN20P56880 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN20P56880 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 AC055876.3-201ENST00000431496 288 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 AC097493.3-201ENST00000509725 367 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN20P56880 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN20P56880 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 AC138649.4-201ENST00000612222 287 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CLDN20P56880 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN20P56880 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CLDN20P56880 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLDN20P56880 AP002414.2-201ENST00000591780 3365 ntBASIC14.57□□□□□ -0.08
CLDN20P56880 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLDN20P56880 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN20P56880 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN20P56880 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN20P56880 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLDN20P56880 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 IGHV3-42-201ENST00000520410 361 ntBASIC14.56□□□□□ -0.08
CLDN20P56880 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.56□□□□□ -0.08
CLDN20P56880 AL158211.3-201ENST00000607385 239 ntBASIC14.56□□□□□ -0.08
CLDN20P56880 AL133215.2-201ENST00000609242 977 ntBASIC14.56□□□□□ -0.08
CLDN20P56880 SPDYE12P-201ENST00000618416 771 ntBASIC14.56□□□□□ -0.08
CLDN20P56880 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLDN20P56880 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLDN20P56880 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN20P56880 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN20P56880 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 SNX18-202ENST00000343017 3140 ntBASIC14.56□□□□□ -0.08
CLDN20P56880 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN20P56880 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN20P56880 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms