Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATXN3P54252 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.27■□□□□ 0.19
ATXN3P54252 AL365209.1-201ENST00000624418 6473 ntBASIC16.26■□□□□ 0.19
ATXN3P54252 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATXN3P54252 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.26■□□□□ 0.19
ATXN3P54252 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.26■□□□□ 0.19
ATXN3P54252 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 RNA5SP410-201ENST00000516285 106 ntBASIC16.26■□□□□ 0.19
ATXN3P54252 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.26■□□□□ 0.19
ATXN3P54252 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
ATXN3P54252 MIR6805-201ENST00000615055 62 ntBASIC16.26■□□□□ 0.19
ATXN3P54252 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATXN3P54252 SPTSSB-204ENST00000617024 1292 ntBASIC16.26■□□□□ 0.19
ATXN3P54252 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 KRT8P49-201ENST00000604166 1432 ntBASIC16.26■□□□□ 0.19
ATXN3P54252 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.26■□□□□ 0.19
ATXN3P54252 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.26■□□□□ 0.19
ATXN3P54252 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATXN3P54252 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
ATXN3P54252 FRMD8P1-201ENST00000440433 1524 ntBASIC16.25■□□□□ 0.19
ATXN3P54252 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.25■□□□□ 0.19
ATXN3P54252 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATXN3P54252 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 BTBD7P1-201ENST00000447253 1453 ntBASIC16.25■□□□□ 0.19
ATXN3P54252 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.25■□□□□ 0.19
ATXN3P54252 RPL37AP1-201ENST00000412502 279 ntBASIC16.25■□□□□ 0.19
ATXN3P54252 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.25■□□□□ 0.19
ATXN3P54252 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.25■□□□□ 0.19
ATXN3P54252 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.25■□□□□ 0.19
ATXN3P54252 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
ATXN3P54252 AL162274.1-201ENST00000617191 1098 ntBASIC16.25■□□□□ 0.19
ATXN3P54252 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.25■□□□□ 0.19
ATXN3P54252 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.25■□□□□ 0.19
ATXN3P54252 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
ATXN3P54252 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
ATXN3P54252 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATXN3P54252 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATXN3P54252 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
ATXN3P54252 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.24■□□□□ 0.19
ATXN3P54252 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATXN3P54252 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms